Basic Information
Locus ID:
gene-BS78_08G090500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 21013014 | 21017280 | - | gene-BS78_08G090500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 79,349.57 Da | 41.91 | 88.16 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 338 | 604 | 1.3E-38 | IPR001245 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 61 | 262 | 5.38E-5 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 324 | 632 | 2.02E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 416 | 612 | 1.8E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 321 | 415 | 1.7E-26 | - |
| SMART | SM00220 | serkin_6 | 335 | 607 | 1.6E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 335 | 616 | 31.2411 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 454 | 466 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 341 | 369 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_034579179.1 | L-type lectin-domain containing receptor kinase IX.1-like [Setaria viridis] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6VND0 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G020100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.131, BH03.146, BH04.1794, CH03.209 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G015000, gene-BS78_08G090500 |