Basic Information
Locus ID:
gene-BS78_08G085600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 20347788 | 20353461 | + | gene-BS78_08G085600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 103,881.48 Da | 34.15 | 97.47 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 615 | 883 | 1.77048E-92 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 269 | 306 | 2.3E-6 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 610 | 878 | 2.7E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 1.2E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 595 | 909 | 3.51E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 305 | 3.57E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 264 | 401 | 2.47E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 427 | 3.0E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 582 | 684 | 5.7E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 685 | 895 | 3.2E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 189 | 7.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 288 | 1.5E-21 | IPR032675 |
| SMART | SM00220 | serkin_6 | 609 | 883 | 4.0E-31 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 270 | 292 | 7.665751 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 609 | 883 | 37.530731 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 729 | 741 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 615 | 637 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025807872.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Panicum hallii] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HD76 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G314900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology