Basic Information
Locus ID:
gene-BS78_08G074700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 18276938 | 18278516 | + | gene-BS78_08G074700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 57,135.63 Da | 41.40 | 95.91 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 254 | 511 | 1.05287E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 250 | 451 | 7.2E-49 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 1 | 170 | 1.9E-26 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 234 | 511 | 4.32E-74 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 40 | 314 | 1.42E-26 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 162 | 4.4E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 325 | 511 | 2.0E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 208 | 324 | 5.3E-32 | - |
| SMART | SM00220 | serkin_6 | 248 | 511 | 3.8E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 248 | 511 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 369 | 381 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 254 | 277 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_039801953.1 | L-type lectin-domain containing receptor kinase SIT2-like [Panicum virgatum] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0U9Y7 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG235500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G074700 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0700200, Pt_Chr0700390 |
| Poaceae | Triticum aestivum | 5 | TraesCS6A02G408600.1.cds1, TraesCS6A02G408700.1 ... |