Basic Information
Locus ID:
gene-BS78_08G065300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 13278163 | 13281038 | - | gene-BS78_08G065300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 62,954.15 Da | 41.13 | 86.06 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 77 | 335 | 3.75654E-139 | - |
| Pfam | PF00069 | Protein kinase domain | 78 | 336 | 2.2E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 382 | 442 | 7.8E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 456 | 513 | 1.9E-11 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 344 | 2.56E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 366 | 514 | 5.28E-41 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 80 | 163 | 8.9E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 164 | 343 | 2.9E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 344 | 516 | 4.8E-50 | - |
| SMART | SM00220 | serkin_6 | 78 | 336 | 5.0E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 488 | 516 | 1.6E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 419 | 447 | 0.72 | IPR002048 |
| SMART | SM00054 | efh_1 | 455 | 483 | 0.17 | IPR002048 |
| SMART | SM00054 | efh_1 | 383 | 411 | 6.3E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 489 | 519 | 11.863342 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 78 | 336 | 49.530495 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 379 | 414 | 15.350267 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 415 | 450 | 8.404312 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 451 | 486 | 13.788124 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 464 | 476 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 198 | 210 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 84 | 107 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 428 | 440 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 392 | 404 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 497 | 509 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | NP_001333928.1 | calcium-dependent protein kinase 8-like [Zea mays] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D6IX89 | Calcium-dependent protein kinase 24 OS=Zea mays OX=4577 GN=103641008 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology