Basic Information
Locus ID:
gene-BS78_08G036000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3920173 | 3945189 | - | gene-BS78_08G036000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 147,365.13 Da | 53.36 | 94.85 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 198 | 308 | 0.00727553 | - |
| Pfam | PF18052 | Rx N-terminal domain | 11 | 86 | 1.4E-9 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 175 | 418 | 2.7E-39 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 160 | 432 | 6.8E-53 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 497 | 883 | 2.55E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 552 | 887 | 1.3E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.70.100 | - | 1071 | 1147 | 8.3E-14 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 418 | 509 | 1.9E-11 | IPR036388 |
| Gene3D | G3DSA:1.20.5.4130 | - | 10 | 113 | 2.5E-13 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 152 | 324 | 8.8E-29 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 330 | 417 | 3.0E-9 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 365 | 379 | 3.3E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 269 | 283 | 3.3E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 690 | 706 | 3.3E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 195 | 210 | 3.3E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1255 | 1280 | - | - |
| Coils | Coil | Coil | 127 | 147 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50950.1 | HOPZ-ACTIVATED RESISTANCE 1. | 0 |
| RefSeq | XP_039823043.1 | disease resistance protein RGA5-like isoform X1 [Panicum virgatum] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811SLV6 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS67244 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology