Basic Information
Locus ID:
gene-BS78_08G017200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1948870 | 1955195 | - | gene-BS78_08G017200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 44,850.57 Da | 55.53 | 61.91 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 373 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040243808.1 | uncharacterized protein LOC120961974 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A811PJC9 | Myb_DNA-bind_3 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS28040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH08.185, BH06.1466, BH06.1764, CH06.1961, CH08.1556 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2BG0169550, gene-QOZ80_4BG0355250 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0693250.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco01G006970, Oco24G009650 |
| Poaceae | Oryza sativa | 6 | LOC_Os01g10770.1, LOC_Os05g27910.1, LOC_Os09g17180.1 ... |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_03G291000, gene-BS78_04G215100 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703412 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G026040, Chr13G014470 |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G496800, Tel7E01G887000 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG015840, gene_TRIDC1BG046630 ... |
| Poaceae | Zea mays | 1 | Zm00001eb033680_P001 |