Basic Information
Locus ID:
gene-BS78_08G009100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1191886 | 1197481 | + | gene-BS78_08G009100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 50,505.67 Da | 44.22 | 87.53 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 313 | 427 | 6.39802E-51 | - |
| CDD | cd14663 | STKc_SnRK3 | 13 | 268 | 2.7507E-172 | - |
| Pfam | PF00069 | Protein kinase domain | 14 | 269 | 5.6E-72 | IPR000719 |
| Pfam | PF03822 | NAF domain | 309 | 368 | 4.3E-23 | IPR004041 |
| SUPERFAMILY | SSF103243 | KA1-like | 341 | 427 | 2.78E-5 | IPR028375 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 299 | 7.69E-91 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 95 | 276 | 4.9E-60 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 306 | 431 | 2.5E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 93 | 1.3E-32 | - |
| SMART | SM00220 | serkin_6 | 14 | 269 | 3.9E-105 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 307 | 331 | 13.205001 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 269 | 51.127636 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 133 | 145 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_025828386.1 | CBL-interacting protein kinase 32 [Panicum hallii] | 0 |
| Q2QY53 | CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK32 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2S3IC69 | non-specific serine/threonine protein kinase OS=Panicum hallii OX=206008 GN=PAHAL_8G020100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology