halophFGD

Basic Information

Locus ID: gene-BS78_08G007300

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Salt stress response/antifungal

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	957306	957743	-	gene-BS78_08G007300

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.53	15,240.16 Da	32.94	81.59	0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01657	Salt stress response/antifungal	36	134	4.8E-20	IPR002902
Gene3D	G3DSA:3.30.430.20	-	30	137	3.2E-24	IPR038408
ProSiteProfiles	PS51473	Gnk2-homologous domain profile.	30	137	18.426001	IPR002902

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23160.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase.
RefSeq	XP_002439110.2	cysteine-rich repeat secretory protein 38 [Sorghum bicolor]
Swiss-Prot	O65468	Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2
TrEMBL	A0A1Z5R002	Gnk2-homologous domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G004950 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	3	BH05.601, CH01.3028, CH04.309
Poaceae	Lolium multiflorum	6	gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... gene-QYE76_025756, gene-QYE76_059519, gene-QYE76_064527
Poaceae	Oryza coarctata	1	Oco09G005110
Poaceae	Oryza sativa	1	LOC_Os10g10540.1
Poaceae	Paspalum vaginatum	2	gene-BS78_05G170900, gene-BS78_08G007300
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... Pt_Chr0604614
Poaceae	Sporobolus alterniflorus	2	Chr09G007730, Chr13G017140
Poaceae	Thinopyrum elongatum	8	Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... Tel2E01G1016700, Tel2E01G1018600, Tel2E01G1019200, Tel2E01G979500, Tel7E01G055100
Poaceae	Triticum aestivum	6	TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... TraesCS2B02G628300.1, TraesCS2D02G503300.1, TraesCS2D02G579600.1, TraesCSU02G036000.1