Basic Information
Locus ID:
gene-BS78_07G207800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
CERK1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 40655478 | 40658939 | + | gene-BS78_07G207800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 40,510.73 Da | 42.88 | 90.36 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 73 | 335 | 3.3318E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 68 | 337 | 3.9E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 338 | 6.2E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 138 | 360 | 2.5E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 37 | 137 | 1.5E-25 | - |
| SMART | SM00220 | serkin_6 | 67 | 340 | 3.3E-37 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 23 | 354 | 5.3E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 341 | 38.463573 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 73 | 95 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 182 | 194 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | NP_001146346.1 | Chitin elicitor receptor kinase 1 precursor [Zea mays] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6U6W7 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G234632v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology