Basic Information
Locus ID:
gene-BS78_07G199000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 39993675 | 39994514 | - | gene-BS78_07G199000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 30,958.64 Da | 31.90 | 100.97 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 13 | 74 | 7.52728E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 95 | 203 | 2.8E-19 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 81 | 238 | 1.22E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 6 | 78 | 1.32E-8 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 2 | 78 | 2.3E-5 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 79 | 203 | 1.3E-29 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 209 | 279 | 2.9E-10 | - |
| SMART | SM00225 | BTB_4 | 102 | 210 | 6.9E-18 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 102 | 165 | 15.555909 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039817418.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9A749 | BTB domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology