Basic Information
Locus ID:
gene-BS78_07G197000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 39844666 | 39845466 | - | gene-BS78_07G197000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 28,796.72 Da | 50.20 | 87.29 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 82 | 194 | 6.63927E-46 | - |
| CDD | cd00121 | MATH | 6 | 68 | 7.32721E-8 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 89 | 196 | 5.5E-27 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 4 | 75 | 4.09E-11 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 76 | 196 | 2.57E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1 | 72 | 1.5E-5 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 73 | 222 | 1.3E-41 | IPR011333 |
| SMART | SM00225 | BTB_4 | 96 | 198 | 5.9E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 96 | 163 | 17.975704 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002444723.1 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1B6PIV6 | BTB domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G198500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology