halophFGD

Basic Information

Locus ID: gene-BS78_07G196600

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: atbpm1,bpm1

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	39809898	39810902	-	gene-BS78_07G196600

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.43	37,366.37 Da	45.29	86.71	-0.12

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	11	139	5.6236E-15	IPR002083
Pfam	PF00651	BTB/POZ domain	159	267	1.7E-25	IPR000210
SUPERFAMILY	SSF49599	TRAF domain-like	19	144	1.26E-19	-
SUPERFAMILY	SSF54695	POZ domain	148	267	1.41E-30	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	144	265	1.8E-34	IPR011333
Gene3D	G3DSA:1.25.40.420	-	270	334	1.0E-14	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	11	143	2.4E-19	IPR008974
SMART	SM00225	BTB_4	166	271	1.5E-25	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	166	233	19.154577	IPR000210
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	12	141	12.004146	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G06190.1	BTB-POZ and MATH domain 2.
RefSeq	XP_002444726.1	BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor]
Swiss-Prot	Q9M8J9	BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1
TrEMBL	A0A1B6PIS1	BTB domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G198600 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	8	AH08.2117, AH08.2120, BH08.2227, BH08.2231, BH08.2233 ... CH08.2406, CH08.2413, CH08.2414
Poaceae	Eleusine coracana subsp. coracana	17	gene-QOZ80_7BG0590860, gene-QOZ80_8AG0629410 ... gene-QOZ80_8AG0637760, gene-QOZ80_8AG0637770, gene-QOZ80_8AG0637780, gene-QOZ80_8AG0637790, gene-QOZ80_8AG0637810, gene-QOZ80_8AG0637840, gene-QOZ80_8AG0637850, gene-QOZ80_8AG0637860, gene-QOZ80_8AG0637870, gene-QOZ80_8BG0657720, gene-QOZ80_8BG0666280, gene-QOZ80_8BG0666290, gene-QOZ80_8BG0666300, gene-QOZ80_8BG0666310, gene-QOZ80_8BG0666330
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.1HG0022760.1.CDS1 ... HORVU.MOREX.r3.7HG0664330.1.CDS1, HORVU.MOREX.r3.7HG0682430.1
Poaceae	Lolium multiflorum	19	gene-QYE76_000085, gene-QYE76_009636, gene-QYE76_009638 ... gene-QYE76_009646, gene-QYE76_009647, gene-QYE76_030105, gene-QYE76_030106, gene-QYE76_030107, gene-QYE76_030114, gene-QYE76_030115, gene-QYE76_030122, gene-QYE76_030164, gene-QYE76_030168, gene-QYE76_030169, gene-QYE76_030178, gene-QYE76_044268, gene-QYE76_044269, gene-QYE76_044273, gene-QYE76_044274
Poaceae	Oryza coarctata	5	Oco15G010530, Oco15G010540, Oco15G010550, Oco15G010900 ... Oco16G012000
Poaceae	Oryza sativa	11	LOC_Os03g48120.1, LOC_Os08g40490.1, LOC_Os08g41120.1 ... LOC_Os08g41150.1, LOC_Os08g41170.1, LOC_Os08g41180.1, LOC_Os08g41190.1, LOC_Os08g41200.1, LOC_Os08g41220.1, LOC_Os08g41240.1, LOC_Os09g06890.1
Poaceae	Paspalum vaginatum	18	gene-BS78_07G112800, gene-BS78_07G194700 ... gene-BS78_07G195100, gene-BS78_07G195200, gene-BS78_07G195400, gene-BS78_07G195500, gene-BS78_07G195600, gene-BS78_07G195800, gene-BS78_07G195900, gene-BS78_07G196000, gene-BS78_07G196100, gene-BS78_07G196400, gene-BS78_07G196500, gene-BS78_07G196600, gene-BS78_07G196700, gene-BS78_07G196900, gene-BS78_07G197000, gene-BS78_07G199000
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0403716, Pt_Chr0403738, Pt_Chr0403966, Pt_Chr0501975 ... Pt_Chr0501977, Pt_Chr0502097, Pt_Chr0600381, Pt_Chr0704303
Poaceae	Sporobolus alterniflorus	4	Chr16G017630, Chr17G016920, Chr17G016930, Chr17G016940
Poaceae	Thinopyrum elongatum	9	Tel1E01G076000, Tel1E01G077100, Tel1E01G190600 ... Tel1E01G190700, Tel1E01G191100, Tel1E01G191400, Tel7E01G450400, Tel7E01G450500, Tel7E01G450800
Poaceae	Triticum dicoccoides	14	gene_TRIDC1AG004010, gene_TRIDC1AG017170 ... gene_TRIDC1AG017180, gene_TRIDC1AG017240, gene_TRIDC1BG004930, gene_TRIDC1BG004970, gene_TRIDC1BG017630, gene_TRIDC1BG017640, gene_TRIDC2BG009930, gene_TRIDC4AG047600, gene_TRIDC7AG032950, gene_TRIDC7AG032960, gene_TRIDC7AG032970, gene_TRIDC7BG024090
Poaceae	Triticum aestivum	23	TraesCS1A02G093100.1, TraesCS1A02G093500.1 ... TraesCS1A02G093700.1, TraesCS1B02G044900.1.cds1, TraesCS1B02G050800.1.cds1, TraesCS1B02G120900.1, TraesCS1B02G121000.1.cds1, TraesCS1B02G121300.1.cds1, TraesCS1B02G121700.1.cds1, TraesCS1B02G121800.1, TraesCS1D02G036200.1.cds1, TraesCS1D02G036400.1.cds1, TraesCS1D02G102100.1.cds1, TraesCS1D02G102200.1.cds1, TraesCS1D02G102300.1, TraesCS7A02G255200.1.cds1, TraesCS7A02G255300.2, TraesCS7B02G080600.1.cds1, TraesCS7B02G151400.1.cds1, TraesCS7B02G151500.1, TraesCS7B02G151600.1.cds1, TraesCS7D02G176800.1.cds1, TraesCS7D02G253700.1.cds1
Poaceae	Zea mays	9	Zm00001eb035890_P001, Zm00001eb035900_P001 ... Zm00001eb035910_P001, Zm00001eb035940_P001, Zm00001eb174790_P001, Zm00001eb174830_P001, Zm00001eb174850_P001, Zm00001eb202820_P001, Zm00001eb328550_P001
Poaceae	Zoysia japonica	5	nbis-gene-17476, nbis-gene-42645, nbis-gene-42646 ... nbis-gene-55558, nbis-gene-57528
Poaceae	Zoysia macrostachya	10	Zma_g13254, Zma_g23281, Zma_g23282, Zma_g23283, Zma_g23284 ... Zma_g23286, Zma_g24396, Zma_g24397, Zma_g24398, Zma_g29496