Basic Information
Locus ID:
gene-BS78_07G195800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 39775196 | 39775930 | - | gene-BS78_07G195800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 26,772.68 Da | 33.58 | 78.44 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 161 | 232 | 8.5E-18 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 146 | 232 | 1.29E-23 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 139 | 240 | 7.1E-28 | IPR011333 |
| SMART | SM00225 | BTB_4 | 168 | 244 | 6.5E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 168 | 231 | 17.872293 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_004974864.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6UCK0 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G222800v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology