Basic Information
Locus ID:
gene-BS78_07G195200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 39751242 | 39753127 | - | gene-BS78_07G195200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 29,418.78 Da | 39.43 | 92.05 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 91 | 197 | 3.8E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 8 | 73 | 2.4E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 77 | 201 | 3.26E-28 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 71 | 230 | 4.0E-45 | IPR011333 |
| SMART | SM00225 | BTB_4 | 98 | 201 | 2.1E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 98 | 164 | 17.127741 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039854770.1 | BTB/POZ and MATH domain-containing protein 1-like isoform X2 [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0RI90 | BTB/POZ domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG370400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology