Basic Information
Locus ID:
gene-BS78_07G195100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 39735934 | 39736921 | - | gene-BS78_07G195100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 19,730.19 Da | 39.76 | 100.11 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 7 | 128 | 1.17324E-14 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 151 | 181 | 1.5E-5 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 136 | 181 | 3.53E-8 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 6 | 132 | 9.32E-20 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 132 | 181 | 3.4E-10 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 6 | 131 | 1.5E-14 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 3 | 128 | 9.70289 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 157 | 181 | 10.799049 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039854770.1 | BTB/POZ and MATH domain-containing protein 1-like isoform X2 [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811R417 | Speckle-type POZ protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS48087 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology