Basic Information
Locus ID:
gene-BS78_07G194900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 39728054 | 39729430 | - | gene-BS78_07G194900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 31,185.07 Da | 55.91 | 77.46 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 147 | 248 | 1.1E-15 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 146 | 251 | 3.77E-20 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 145 | 280 | 3.5E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 142 | 253 | 3.7E-13 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 142 | 209 | 11.895195 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025822473.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T172 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-BS78_07G194900.