Basic Information
Locus ID:
gene-BS78_07G189800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 39243776 | 39246343 | + | gene-BS78_07G189800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 75,704.62 Da | 42.42 | 89.16 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 81 | 6.2E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 404 | 601 | 1.9E-24 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 132 | 192 | 6.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 225 | 5.53E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 678 | 1.94E-42 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 476 | 706 | 1.7E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 152 | 7.3E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 367 | 475 | 8.3E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 246 | 1.8E-18 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 685 | 23.721811 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 690 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 295 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034601344.1 | pollen receptor-like kinase 4 [Setaria viridis] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6U693 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G218200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology