halophFGD

Basic Information

Locus ID: gene-BS78_07G182100

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Ubiquitin system component Cue protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	38679679	38684682	+	gene-BS78_07G182100

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.13	31,783.18 Da	38.33	76.77	-0.75

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	17	46	-	-
Coils	Coil	Coil	198	257	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT5G32440.1	Ubiquitin system component Cue protein.
RefSeq	XP_003571630.1	uncharacterized protein LOC100825830 [Brachypodium distachyon]
TrEMBL	I1I2S3	CUE domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100825830 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg13494, jg18253, jg25445, jg31708, jg33047
Aizoaceae	Mesembryanthemum crystallinum	3	gene_26213, gene_7277, gene_8961
Amaranthaceae	Atriplex hortensis	2	Ah010552, Ah014301
Amaranthaceae	Beta vulgaris	2	BVRB_8g193840, BVRB_9g219250
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg25638, Sbi_jg25639, Sbi_jg31576, Sbi_jg9443
Amaranthaceae	Salicornia europaea	2	Seu_jg19163, Seu_jg19164
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00005155, GOSA_00011001
Amaranthaceae	Suaeda glauca	5	Sgl09606, Sgl41985, Sgl46759, Sgl56382, Sgl61913
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000009749, gene:ENSEOMG00000017224 ... gene:ENSEOMG00000033212, gene:ENSEOMG00000039431, gene:ENSEOMG00000047085, gene:ENSEOMG00000051048
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.7BG0009740, CQ.Regalona.r1.8AG0022370 ... CQ.Regalona.r1.8BG0020060, CQ.Regalona.r1.9AG0014890
Anacardiaceae	Pistacia vera	3	pistato.v30128490, pistato.v30261410, pistato.v30271050
Apiaceae	Apium graveolens	3	Ag4G00112, Ag4G01643, Ag9G01179
Arecaceae	Cocos nucifera	4	COCNU_01G010680, COCNU_01G018720, COCNU_04G015050 ... COCNU_11G007870
Arecaceae	Phoenix dactylifera	5	gene-LOC103703441, gene-LOC103704320, gene-LOC103706495 ... gene-LOC103711481, gene-LOC103723021
Asparagaceae	Asparagus officinalis	7	AsparagusV1_02.163.V1.1, AsparagusV1_03.1996.V1.1 ... AsparagusV1_05.195.V1.1, AsparagusV1_05.3273.V1.1, AsparagusV1_06.56.V1.1, AsparagusV1_07.236.V1.1, AsparagusV1_08.2579.V1.1
Asteraceae	Flaveria trinervia	3	Ftri14G15972, Ftri18G30768, Ftri4G00145
Brassicaceae	Arabidopsis thaliana	3	AT1G80040.3, AT5G02510.1, AT5G32440.3
Brassicaceae	Eutrema salsugineum	2	Thhalv10003459m.g.v1.0, Thhalv10019034m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g25410.v2.2, Sp5g35810.v2.2, Sp6g40000.v2.2
Brassicaceae	Brassica nigra	6	BniB03g016590.2N, BniB03g033830.2N, BniB04g044050.2N ... BniB06g051740.2N, BniB06g068730.2N, BniB07g019110.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq02G0329, Ceq02G2697, Ceq06G0588, Ceq08G1185
Casuarinaceae	Casuarina glauca	5	Cgl02G0343, Cgl02G2794, Cgl02G2795, Cgl06G0607, Cgl08G1211
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno15g07390, gene.Cymno17g04840
Dunaliellaceae	Dunaliella salina	1	Dusal.0257s00007.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g33830, gene.Thate04g29140
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-8142
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.1267, evm.TU.LG01.502, evm.TU.LG07.644
Plantaginaceae	Plantago ovata	7	Pov_00004064, Pov_00004070, Pov_00004080, Pov_00004185 ... Pov_00011446, Pov_00020219, Pov_00036935
Plumbaginaceae	Limonium bicolor	5	Lb6G32053, Lb6G32054, Lb6G32346, Lb6G32349, Lb6G32351
Poaceae	Echinochloa crus-galli	9	AH03.1254, AH06.2423, AH07.619, BH03.1354, BH06.2221 ... BH07.743, CH01.1612, CH03.1558, CH06.2441
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_2AG0104100, gene-QOZ80_2BG0157430 ... gene-QOZ80_6AG0523460, gene-QOZ80_6AG0546130, gene-QOZ80_6BG0476400, gene-QOZ80_6BG0499520
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.5HG0468390.1, HORVU.MOREX.r3.6HG0567800.1 ... HORVU.MOREX.r3.7HG0745710.1
Poaceae	Lolium multiflorum	4	gene-QYE76_003976, gene-QYE76_007591, gene-QYE76_037753 ... gene-QYE76_053727
Poaceae	Oryza coarctata	6	Oco03G004320, Oco04G004310, Oco11G013630, Oco12G013800 ... Oco17G000390, Oco18G000350
Poaceae	Oryza sativa	4	LOC_Os02g09180.1, LOC_Os06g43550.1, LOC_Os08g22200.1 ... LOC_Os09g03090.1
Poaceae	Paspalum vaginatum	3	gene-BS78_04G063800, gene-BS78_07G182100 ... gene-BS78_10G204200
Poaceae	Puccinellia tenuiflora	6	Pt_Chr0202276, Pt_Chr0207104, Pt_Chr0401681, Pt_Chr0401686 ... Pt_Chr0705001, Pt_Chr0705265
Poaceae	Sporobolus alterniflorus	7	Chr02G030680, Chr05G008430, Chr06G033760, Chr10G018840 ... Chr11G003800, Chr11G014510, Chr15G025000
Poaceae	Thinopyrum elongatum	4	Tel5E01G277900, Tel5E01G765900, Tel6E01G302000 ... Tel7E01G906900
Poaceae	Triticum dicoccoides	6	gene_TRIDC5AG026940, gene_TRIDC5BG028050 ... gene_TRIDC6AG019830, gene_TRIDC6BG025830, gene_TRIDC7AG073100, gene_TRIDC7BG069300
Poaceae	Triticum aestivum	11	TraesCS5A02G162300.2, TraesCS5B02G159800.1 ... TraesCS5B02G495600.1.cds1, TraesCS5B02G501600.1.cds1, TraesCS5D02G166600.1, TraesCS6A02G144700.3, TraesCS6B02G172800.1, TraesCS6D02G133600.4, TraesCS7A02G521400.1, TraesCS7B02G438200.1, TraesCS7D02G510900.1
Poaceae	Zea mays	3	Zm00001eb234410_P002, Zm00001eb275390_P001 ... Zm00001eb387140_P001
Poaceae	Zoysia japonica	4	nbis-gene-33564, nbis-gene-40924, nbis-gene-44151 ... nbis-gene-9933
Poaceae	Zoysia macrostachya	4	Zma_g12327, Zma_g15078, Zma_g30878, Zma_g33127
Portulacaceae	Portulaca oleracea	4	evm.TU.LG06.1261, evm.TU.LG11.608, evm.TU.LG16.1618 ... evm.TU.LG26.49
Posidoniaceae	Posidonia oceanica	3	gene.Posoc04g15390, gene.Posoc07g14910, gene.Posoc10g04450
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_10_RagTag.65, evm.TU.Scaffold_1_RagTag.1189 ... evm.TU.Scaffold_2_RagTag.1156, evm.TU.Scaffold_3_RagTag.219, evm.TU.Scaffold_4_RagTag.2287
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-12885, nbisL1-mrna-25154, nbisL1-mrna-28118 ... nbisL1-mrna-3796, nbisL1-mrna-403, nbisL1-mrna-467
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-12238, nbisL1-mrna-20622, nbisL1-mrna-8495
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-16503, nbisL1-mrna-18842, nbisL1-mrna-5033
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000008l.1342, evm.TU.utg000009l.535 ... evm.TU.utg000033l.44
Rhizophoraceae	Kandelia obovata	3	Maker00000900, Maker00006075, Maker00014954
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-16729, nbisL1-mrna-1840, nbisL1-mrna-19371
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-14469, nbisL1-mrna-22317, nbisL1-mrna-2353 ... nbisL1-mrna-5573
Salicaceae	Populus euphratica	3	populus_peu05735, populus_peu11108, populus_peu14207
Solanaceae	Lycium barbarum	5	gene-LOC132598783, gene-LOC132603141, gene-LOC132603644 ... gene-LOC132633004, gene-LOC132636970
Solanaceae	Solanum chilense	4	SOLCI002672200, SOLCI005010900, SOLCI005922400 ... SOLCI007110800
Solanaceae	Solanum pennellii	7	gene-LOC107005314, gene-LOC107005705, gene-LOC107012222 ... gene-LOC107021644, gene-LOC107022438, gene-LOC107022440, gene-LOC107025898
Tamaricaceae	Reaumuria soongarica	3	STRG.19239_chr07_-, STRG.27479_chr04_+, gene_8985
Tamaricaceae	Tamarix chinensis	3	TC02G2586, TC08G2217, TC10G1269
Zosteraceae	Zostera marina	2	Zosma02g00530.v3.1, Zosma03g23440.v3.1