Basic Information
Locus ID:
gene-BS78_07G176800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 38198614 | 38199770 | + | gene-BS78_07G176800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 41,215.29 Da | 44.88 | 77.14 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 51 | 2.3E-5 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 216 | 303 | 2.0E-4 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 77 | 4.19E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 16 | 55 | 1.1E-6 | - |
| SMART | SM00256 | fbox_2 | 18 | 58 | 1.2E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 119 | 330 | 9.2E-21 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025822451.1 | uncharacterized protein LOC112898321 [Panicum hallii] | 0 |
| TrEMBL | A0A5J9T1U7 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48515 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology