Basic Information
Locus ID:
gene-BS78_07G176700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 38194501 | 38195744 | + | gene-BS78_07G176700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 43,700.03 Da | 50.41 | 83.58 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 41 | 4.3E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 43 | 1.83E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 50 | 5.8E-6 | - |
| SMART | SM00256 | fbox_2 | 10 | 50 | 1.8E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 89 | 310 | 3.9E-20 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 63 | 9.550458 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025822451.1 | uncharacterized protein LOC112898321 [Panicum hallii] | 0 |
| TrEMBL | A0A2T7D906 | FBA_3 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G238600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology