Basic Information
Locus ID:
gene-BS78_07G172900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 37943967 | 37948705 | - | gene-BS78_07G172900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 88,827.32 Da | 44.49 | 79.31 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 86 | 282 | 1.72306E-97 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 100 | 259 | 4.1E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 264 | 761 | 8.8E-195 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 76 | 292 | 1.7E-61 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 335 | 593 | 2.05E-91 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 614 | 735 | 4.05E-33 | IPR037196 |
| Gene3D | G3DSA:1.20.120.790 | - | 593 | 739 | 8.1E-52 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 506 | 592 | 3.0E-33 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 63 | 305 | 1.6E-88 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 333 | 505 | 4.7E-75 | - |
| SMART | SM00387 | HKATPase_4 | 99 | 261 | 1.9E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 50 | 776 | 3.1E-239 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 97 | 106 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 249 | 266 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 77 | 97 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 98 | 120 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 194 | 216 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 147 | 164 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 268 | 286 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 165 | 182 | 4.4E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 74 | 736 | 26.051191 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 787 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_034600204.1 | heat shock protein 90-5, chloroplastic-like [Setaria viridis] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6U5G3 | HATPase_c domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G197700v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology