Basic Information
Locus ID:
gene-BS78_07G159300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 36514571 | 36522811 | + | gene-BS78_07G159300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 61,717.66 Da | 36.87 | 88.06 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 423 | 560 | 4.55995E-29 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 448 | 560 | 2.8E-17 | IPR001229 |
| Pfam | PF00069 | Protein kinase domain | 19 | 301 | 3.5E-46 | IPR000719 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 410 | 560 | 2.75E-30 | IPR036404 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 321 | 2.19E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 313 | 5.8E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 84 | 6.0E-20 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 404 | 560 | 1.0E-33 | IPR036404 |
| SMART | SM00220 | serkin_6 | 18 | 310 | 1.4E-31 | IPR000719 |
| SMART | SM00915 | Jacalin_2 | 423 | 560 | 1.7E-5 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 412 | 561 | 23.980555 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 317 | 35.580238 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 414 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27300.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_040253279.1 | putative receptor-like protein kinase At4g00960 isoform X1 [Aegilops tauschii subsp. strangulata] | 0 |
| O81833 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana OX=3702 GN=SD11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453Q9B6 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G159300, gene-BS78_08G008800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0501084, Pt_Chr0501097 |