Basic Information
Locus ID:
gene-BS78_07G151100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 35668332 | 35674870 | - | gene-BS78_07G151100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 76,257.40 Da | 46.41 | 92.36 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 373 | 641 | 2.8E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 81 | 120 | 1.1E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 171 | 231 | 2.6E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 81 | 245 | 6.8E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 352 | 645 | 2.19E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 446 | 1.1E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 80 | 261 | 5.4E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 663 | 8.3E-59 | - |
| SMART | SM00220 | serkin_6 | 371 | 644 | 1.4E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 654 | 35.057278 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 377 | 399 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 489 | 501 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 49 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002445573.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Sorghum bicolor] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1B6PHS9 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G142900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology