Basic Information
Locus ID:
gene-BS78_07G148400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 35309340 | 35320508 | - | gene-BS78_07G148400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 74,350.61 Da | 38.93 | 91.79 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 291 | 323 | 3.43043E-8 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 401 | 658 | 6.8E-46 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 29 | 78 | 1.2E-8 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 291 | 327 | 1.3E-7 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 290 | 325 | 2.35E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 658 | 1.3E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 471 | 1.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 472 | 672 | 1.0E-52 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 243 | 332 | 3.5E-12 | - |
| SMART | SM00181 | egf_5 | 294 | 333 | 0.24 | IPR000742 |
| SMART | SM00179 | egfca_6 | 291 | 333 | 1.0E-8 | IPR001881 |
| SMART | SM00220 | serkin_6 | 399 | 661 | 1.1E-29 | IPR000719 |
| SMART | SM00181 | egf_5 | 243 | 290 | 21.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 399 | 662 | 36.117329 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 405 | 430 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 291 | 316 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 307 | 318 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 515 | 527 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_034600688.1 | wall-associated receptor kinase 2-like [Setaria viridis] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5W6K3 | Wall-associated receptor kinase 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology