Basic Information
Locus ID:
gene-BS78_07G139800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 33928663 | 33930718 | - | gene-BS78_07G139800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 68,879.99 Da | 49.59 | 92.36 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 79 | 139 | 2.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 70 | 7.7E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 367 | 629 | 5.7E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 368 | 631 | 5.06E-44 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 222 | 2.55E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 356 | 439 | 3.0E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 652 | 5.2E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 230 | 9.5E-38 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 637 | 27.071569 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_025822415.1 | probable inactive receptor kinase RLK902 [Panicum hallii] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6RMT2 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM13G12890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology