Basic Information
Locus ID:
gene-BS78_07G116800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 22057488 | 22060932 | + | gene-BS78_07G116800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 102,832.33 Da | 39.65 | 107.34 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 673 | 885 | 3.5E-41 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 501 | 542 | 1.5E-6 | IPR025875 |
| Pfam | PF00560 | Leucine Rich Repeat | 190 | 212 | 1.7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 69 | 126 | 2.8E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 214 | 273 | 2.2E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 298 | 568 | 1.29E-47 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 70 | 370 | 1.73E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 666 | 944 | 3.28E-69 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 310 | 593 | 6.9E-72 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 236 | 9.5E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 655 | 754 | 9.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 309 | 8.9E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 180 | 1.9E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 755 | 958 | 1.0E-55 | - |
| SMART | SM00220 | serkin_6 | 671 | 951 | 1.6E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 163 | 188 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 113 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 236 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 137 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 260 | 284 | 49.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 671 | 966 | 34.831135 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 799 | 811 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 524 | 537 | 5.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 503 | 516 | 5.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_025822373.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811PP64 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS29408 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology