Basic Information
Locus ID:
gene-BS78_07G112800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 20691105 | 20692193 | + | gene-BS78_07G112800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 39,657.89 Da | 41.96 | 84.59 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 201 | 294 | 8.9E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 162 | 296 | 3.4E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 153 | 329 | 9.4E-32 | IPR011333 |
| SMART | SM00225 | BTB_4 | 184 | 298 | 5.8E-11 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 184 | 261 | 11.398828 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039815190.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q6IQ16 | Speckle-type POZ protein-like OS=Homo sapiens OX=9606 GN=SPOPL PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0QZN3 | BTB domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG211503 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology