Basic Information
Locus ID:
gene-BS78_07G112200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 20438991 | 20440054 | - | gene-BS78_07G112200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 31,772.84 Da | 49.77 | 86.83 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 106 | 221 | 2.34721E-52 | - |
| CDD | cd00121 | MATH | 20 | 59 | 5.38549E-8 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 112 | 224 | 1.8E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 90 | 4.67E-11 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 97 | 223 | 4.32E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 71 | 8.9E-6 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 224 | 284 | 5.6E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 96 | 219 | 7.7E-39 | IPR011333 |
| SMART | SM00225 | BTB_4 | 120 | 225 | 7.3E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 120 | 183 | 18.616846 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039816596.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835E680 | Speckle-type POZ protein-like protein OS=Digitaria exilis OX=1010633 GN=HU200_056242 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology