Basic Information
Locus ID:
gene-BS78_07G093600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 11869081 | 11870188 | + | gene-BS78_07G093600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 26,028.40 Da | 34.54 | 73.25 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 102 | 205 | 1.1E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 93 | 205 | 1.26E-16 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 18 | 54 | 2.78E-5 | - |
| Gene3D | G3DSA:6.10.250.3030 | - | 169 | 225 | 6.1E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 76 | 155 | 6.5E-17 | IPR011333 |
| SMART | SM00225 | BTB_4 | 110 | 208 | 0.002 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 110 | 139 | 11.419509 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002444090.1 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835BQG4 | Speckle-type POZ protein-like protein OS=Digitaria exilis OX=1010633 GN=HU200_037626 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-BS78_07G093600.