halophFGD

Basic Information

Locus ID: gene-BS78_07G089000

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	10540647	10541700	-	gene-BS78_07G089000

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.81	35,622.79 Da	36.08	91.13	-0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	24	124	4.14758E-12	IPR002083
Pfam	PF00651	BTB/POZ domain	147	252	2.9E-23	IPR000210
SUPERFAMILY	SSF49599	TRAF domain-like	21	125	7.68E-16	-
SUPERFAMILY	SSF54695	POZ domain	147	251	2.08E-24	IPR011333
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	20	132	2.6E-10	IPR008974
Gene3D	G3DSA:1.25.40.420	-	254	319	1.4E-19	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	140	253	7.0E-29	IPR011333
SMART	SM00225	BTB_4	147	253	9.2E-19	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	147	214	15.121588	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.
RefSeq	XP_002445248.1	BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor]
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1
TrEMBL	C5YJ19	Speckle-type POZ protein-like protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G083400 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	BH08.750, CH08.831
Poaceae	Eleusine coracana subsp. coracana	13	gene-QOZ80_1AG0015000, gene-QOZ80_1AG0021060 ... gene-QOZ80_1BG0070830, gene-QOZ80_8AG0622320, gene-QOZ80_8AG0622330, gene-QOZ80_8AG0622440, gene-QOZ80_8BG0650490, gene-QOZ80_8BG0650500, gene-QOZ80_8BG0650560, gene-QOZ80_8BG0650580, gene-QOZ80_8BG0650670, gene-QOZ80_8BG0650690, gene-QOZ80_8BG0650890
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.2HG0203960.1.CDS1 ... HORVU.MOREX.r3.3HG0315010.1.CDS1, HORVU.MOREX.r3.5HG0428360.1.CDS1, HORVU.MOREX.r3.5HG0521670.1.CDS1, HORVU.MOREX.r3.5HG0521740.1.CDS1, HORVU.MOREX.r3.5HG0523460.1.CDS1, HORVU.MOREX.r3.5HG0523530.1.CDS1, HORVU.MOREX.r3.6HG0608320.1.CDS1
Poaceae	Lolium multiflorum	14	gene-QYE76_002089, gene-QYE76_025251, gene-QYE76_032441 ... gene-QYE76_032457, gene-QYE76_032458, gene-QYE76_032466, gene-QYE76_033077, gene-QYE76_033202, gene-QYE76_045021, gene-QYE76_045023, gene-QYE76_045044, gene-QYE76_047037, gene-QYE76_061086, gene-QYE76_061088
Poaceae	Oryza coarctata	6	Oco13G000570, Oco15G004430, Oco15G004440, Oco15G004530 ... Oco16G004240, Oco16G004260
Poaceae	Oryza sativa	8	LOC_Os08g12960.1, LOC_Os08g13000.1, LOC_Os08g13030.1 ... LOC_Os08g13060.1, LOC_Os08g13070.1, LOC_Os08g13090.1, LOC_Os08g13180.1, LOC_Os08g13250.1
Poaceae	Paspalum vaginatum	7	gene-BS78_07G085000, gene-BS78_07G087600 ... gene-BS78_07G087700, gene-BS78_07G087900, gene-BS78_07G089000, gene-BS78_07G112200, gene-BS78_09G004100
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0304944, Pt_Chr0304972, Pt_Chr0402463, Pt_Chr0700706 ... Pt_Chr0703725
Poaceae	Sporobolus alterniflorus	5	Chr16G002950, Chr17G002660, Chr17G002930, Chr20G009960 ... Chr29G009610
Poaceae	Thinopyrum elongatum	16	Tel2E01G139200, Tel3E01G573600, Tel3E01G738800 ... Tel4E01G194200, Tel5E01G094800, Tel5E01G094900, Tel5E01G095500, Tel5E01G713700, Tel5E01G713800, Tel5E01G714700, Tel5E01G730000, Tel5E01G730600, Tel6E01G504000, Tel6E01G732200, Tel6E01G732300, Tel7E01G299100
Poaceae	Triticum dicoccoides	24	gene_TRIDC2AG006740, gene_TRIDC2BG055980 ... gene_TRIDC3AG045740, gene_TRIDC3BG051930, gene_TRIDC4AG030830, gene_TRIDC4BG019020, gene_TRIDC5AG006200, gene_TRIDC5AG006240, gene_TRIDC5AG006280, gene_TRIDC5AG064800, gene_TRIDC5AG064810, gene_TRIDC5AG064860, gene_TRIDC5AG066270, gene_TRIDC5AG066290, gene_TRIDC5BG007100, gene_TRIDC5BG069750, gene_TRIDC5BG069790, gene_TRIDC5BG071220, gene_TRIDC5BG071250, gene_TRIDC6AG042220, gene_TRIDC6AG059050, gene_TRIDC6BG049170, gene_TRIDC7AG017940, gene_TRIDC7BG007330
Poaceae	Triticum aestivum	47	TraesCS2A02G508000.1, TraesCS2B02G074000.1 ... TraesCS2B02G383700.1.cds1, TraesCS2B02G383900.1.cds1, TraesCS2B02G384100.1.cds1, TraesCS2D02G059500.1, TraesCS3B02G507600.1.cds1, TraesCS4A02G193000.1.cds1, TraesCS4B02G122200.1.cds1, TraesCS4D02G120300.1.cds1, TraesCS5A02G040800.1.cds1, TraesCS5A02G040900.1.cds1, TraesCS5A02G041300.1.cds1, TraesCS5A02G041400.1.cds1, TraesCS5A02G451500.1.cds1, TraesCS5A02G451600.1, TraesCS5A02G451700.1, TraesCS5A02G451900.1.cds1, TraesCS5A02G461800.1, TraesCS5A02G462000.1.cds1, TraesCS5B02G042100.1.cds1, TraesCS5B02G042300.1.cds1, TraesCS5B02G043200.1.cds1, TraesCS5B02G460300.1.cds1, TraesCS5B02G460400.1.cds1, TraesCS5B02G460600.1.cds1, TraesCS5B02G472000.1.cds1, TraesCS5B02G472100.1.cds1, TraesCS5B02G472400.1.cds1, TraesCS5B02G472500.1.cds1, TraesCS5B02G472600.1.cds1, TraesCS5B02G472700.1.cds1, TraesCS5D02G047800.1, TraesCS5D02G047900.1.cds1, TraesCS5D02G048000.1.cds1, TraesCS5D02G048300.1.cds1, TraesCS5D02G461700.1.cds1, TraesCS5D02G461800.1, TraesCS5D02G462100.1.cds1, TraesCS5D02G474700.1.cds1, TraesCS6A02G275800.1.cds1, TraesCS6A02G401700.1.cds1, TraesCS6B02G303100.1.cds1, TraesCS6B02G443900.1.cds1, TraesCS6D02G256000.1.cds1, TraesCS7B02G049700.1, TraesCS7D02G148800.1.cds1
Poaceae	Zea mays	1	Zm00001eb170960_P001
Poaceae	Zoysia japonica	2	nbis-gene-37558, nbis-gene-51285
Poaceae	Zoysia macrostachya	3	Zma_g20780, Zma_g22653, Zma_g23801