Basic Information
Locus ID:
gene-BS78_07G087700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 10328876 | 10329601 | - | gene-BS78_07G087700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 26,880.67 Da | 36.52 | 96.22 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 53 | 167 | 3.0E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 39 | 166 | 2.51E-30 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 167 | 240 | 1.4E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 37 | 163 | 3.1E-35 | IPR011333 |
| SMART | SM00225 | BTB_4 | 61 | 168 | 8.9E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 61 | 128 | 16.07296 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002463053.1 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811N796 | Speckle-type POZ protein-like protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS11530 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology