Basic Information
Locus ID:
gene-BS78_07G085000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 9676466 | 9677287 | - | gene-BS78_07G085000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 30,645.04 Da | 42.11 | 96.08 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 87 | 199 | 5.8E-21 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 73 | 199 | 6.91E-29 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 199 | 269 | 1.0E-21 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 71 | 194 | 1.5E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 95 | 200 | 1.3E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 95 | 162 | 16.279779 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039815052.1 | BTB/POZ and MATH domain-containing protein 2-like, partial [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0QXC4 | BTB domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG104503 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology