Basic Information
Locus ID:
gene-BS78_07G082500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 9374243 | 9378090 | - | gene-BS78_07G082500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 31,187.75 Da | 44.46 | 79.69 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 132 | 284 | 2.5E-24 | IPR025886 |
| Pfam | PF12937 | F-box-like | 22 | 61 | 7.6E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 71 | 2.22E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 107 | 2.0E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 63 | 9.232525 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02230.1 | phloem protein 2-B1. | 0 |
| RefSeq | XP_025822177.1 | F-box protein PP2-B10-like [Panicum hallii] | 0 |
| Q6NPT8 | F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PSR6 | Phloem-specific lectin OS=Panicum miliaceum OX=4540 GN=C2845_PM14G02640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology