Basic Information
Locus ID:
gene-BS78_07G078600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 8687321 | 8691015 | - | gene-BS78_07G078600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 72,162.94 Da | 44.27 | 84.68 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 20 | 57 | 6.1E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 67 | 7.19E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 166 | 579 | 3.45E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 380 | 9.6E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 61 | 7.1E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 18 | 66 | 10.080346 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 427 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00160.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_039853298.1 | uncharacterized protein LOC120711738 [Panicum virgatum] | 0 |
| Q8LF09 | F-box/FBD/LRR-repeat protein At4g00160 OS=Arabidopsis thaliana OX=3702 GN=At4g00160 PE=2 SV=2 | 0 | |
| TrEMBL | A0A811PHY2 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS31234 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology