Basic Information
Locus ID:
gene-BS78_07G078100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 8641364 | 8644012 | - | gene-BS78_07G078100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 67,765.66 Da | 38.60 | 91.44 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 346 | 611 | 1.5E-46 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 27 | 80 | 2.8E-10 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 346 | 613 | 8.39E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 421 | 6.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 616 | 1.7E-53 | - |
| SMART | SM00220 | serkin_6 | 346 | 614 | 7.8E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 614 | 37.983017 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 352 | 376 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 466 | 478 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16260.3 | - | 0 |
| RefSeq | XP_034584085.1 | wall-associated receptor kinase 1-like isoform X2 [Setaria viridis] | 0 |
| Q9SA25 | Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811QZW4 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS47669 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology