Basic Information
Locus ID:
gene-BS78_07G043700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 4376236 | 4379031 | - | gene-BS78_07G043700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 37,228.33 Da | 52.58 | 77.46 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 135 | 334 | 8.3E-30 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 71 | 1.01E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 108 | 1.1E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 18 | 64 | 8.808615 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 101 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02230.1 | phloem protein 2-B1. | 0 |
| RefSeq | XP_025822177.1 | F-box protein PP2-B10-like [Panicum hallii] | 0 |
| Q6NPT8 | F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3I062 | F-box domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G033400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology