Basic Information
Locus ID:
gene-BS78_07G041300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 4171089 | 4174759 | + | gene-BS78_07G041300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 72,664.70 Da | 46.65 | 88.02 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 375 | 609 | 5.4E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 210 | 270 | 1.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 91 | 148 | 4.7E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 675 | 1.24E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 3 | 272 | 1.41E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 273 | 3.0E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 469 | 695 | 1.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 468 | 5.0E-18 | - |
| SMART | SM00369 | LRR_typ_2 | 112 | 136 | 9.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 256 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 16 | 40 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 371 | 679 | 1.5E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 685 | 37.191513 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 520 | 532 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 377 | 400 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 430 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025821795.1 | leucine-rich repeat receptor-like protein kinase TDR [Panicum hallii] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PRB4 | Leucine-rich repeat receptor-like protein kinase TDR OS=Panicum miliaceum OX=4540 GN=C2845_PM14G02460 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology