Basic Information
Locus ID:
gene-BS78_07G026900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 2569589 | 2612229 | - | gene-BS78_07G026900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 240,428.05 Da | 47.95 | 95.20 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 21 | 300 | 1.8E-48 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 315 | 405 | 3.8E-6 | IPR000535 |
| Pfam | PF00931 | NB-ARC domain | 514 | 745 | 3.1E-34 | IPR002182 |
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 1687 | 2097 | 2.0E-181 | IPR002554 |
| SUPERFAMILY | SSF49354 | PapD-like | 307 | 446 | 2.46E-12 | IPR008962 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 496 | 758 | 6.5E-47 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 828 | 1370 | 9.52E-44 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1239 | 1540 | 1.18E-21 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 1700 | 2092 | 9.4E-151 | IPR016024 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 302 | 2.97E-66 | IPR011009 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 313 | 444 | 5.2E-13 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 90 | 1.7E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 937 | 1172 | 3.3E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1173 | 1385 | 7.1E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 739 | 838 | 4.8E-8 | IPR036388 |
| Gene3D | G3DSA:1.25.10.10 | - | 1694 | 2096 | 5.7E-187 | IPR011989 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 112 | 312 | 1.1E-48 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 485 | 648 | 4.6E-26 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 871 | 936 | 2.6E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1407 | 1578 | 6.0E-21 | IPR032675 |
| SMART | SM00220 | serkin_6 | 20 | 302 | 1.3E-30 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 314 | 439 | 11.936566 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 309 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 26 | 49 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 691 | 705 | 1.7E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 524 | 539 | 1.7E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1108 | 1124 | 1.7E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 593 | 607 | 1.7E-14 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13460.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. | 0 |
| RefSeq | XP_004964550.1 | uncharacterized protein LOC101769334 isoform X1 [Setaria italica] | 0 |
| Q8LF36 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform OS=Arabidopsis thaliana OX=3702 GN=B'THETA PE=1 SV=2 | 0 | |
| TrEMBL | K3ZGV8 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology