Basic Information
Locus ID:
gene-BS78_06G263600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 40387000 | 40397185 | + | gene-BS78_06G263600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 45,160.44 Da | 40.32 | 111.75 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 76 | 231 | 1.1E-19 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 266 | 405 | 7.3E-22 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 251 | 409 | 4.4E-19 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 105 | 243 | 1.6E-14 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 45 | 408 | 8.6E-118 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 58 | 408 | 2.5E-105 | IPR004798 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 0 |
| RefSeq | XP_025825684.1 | vacuolar cation/proton exchanger 3 [Panicum hallii] | 0 |
| Q6K1C4 | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3L6QAS2 | Vacuolar cation/proton exchanger OS=Panicum miliaceum OX=4540 GN=C2845_PM15G23770 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology