Basic Information
Locus ID:
gene-BS78_06G235800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 38459207 | 38460987 | + | gene-BS78_06G235800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 43,374.88 Da | 39.80 | 79.87 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 52 | 181 | 1.82695E-21 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 209 | 319 | 2.23654E-48 | - |
| Pfam | PF00651 | BTB/POZ domain | 210 | 320 | 8.4E-27 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 50 | 189 | 1.41E-28 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 202 | 319 | 1.39E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 321 | 396 | 8.2E-20 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 52 | 187 | 3.6E-25 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 195 | 317 | 2.5E-37 | IPR011333 |
| SMART | SM00225 | BTB_4 | 220 | 322 | 3.3E-23 | IPR000210 |
| SMART | SM00061 | math_3 | 56 | 165 | 4.6E-4 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 51 | 183 | 22.308655 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 220 | 283 | 17.603428 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039774063.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5UNG4 | BTB/POZ and MATH domain-containing protein 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0024581 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology