Basic Information
Locus ID:
gene-BS78_06G232200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
BAG domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 38213816 | 38218375 | + | gene-BS78_06G232200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.54 | 40,781.05 Da | 52.94 | 78.86 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02179 | BAG domain | 264 | 336 | 4.7E-6 | IPR003103 |
| Pfam | PF00240 | Ubiquitin family | 170 | 235 | 6.3E-7 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 156 | 239 | 1.75E-16 | IPR029071 |
| SUPERFAMILY | SSF63491 | BAG domain | 222 | 343 | 2.16E-14 | IPR036533 |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 238 | 343 | 2.6E-31 | IPR036533 |
| Gene3D | G3DSA:3.10.20.90 | - | 167 | 237 | 4.9E-20 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 166 | 235 | 11.31153 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 80 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07220.1 | BCL-2-associated athanogene 3. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_039821045.1 | BAG family molecular chaperone regulator 1-like [Panicum virgatum] | 0 |
| Q9LYP4 | BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0Q6Q0 | Ubiquitin-like domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG397000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg25025, jg38766 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30075900 |
| Arecaceae | Cocos nucifera | 2 | scaffold000682G000020, scaffold001635G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103716262 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.1749.V1.1, AsparagusV1_07.3448.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0110 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0168 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno13g02470 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g01760 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.148 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013080 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2324, BH09.2522, CH09.2759 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303610, gene-QOZ80_4BG0334500 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0195140.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_046339 |
| Poaceae | Oryza coarctata | 2 | Oco07G016190, Oco08G015690 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g52890.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G232200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0301131 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G004600, Chr25G002920, Chr26G015830, Chr30G002870 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G784300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG065860, gene_TRIDC2BG070930 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G463500.1, TraesCS2B02G485500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb070410_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-17587, nbis-gene-22896 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g20469 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc08g07400, gene.Posoc10g05070 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.942 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-16714, nbisL1-mrna-16790 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-19165, nbisL1-mrna-2120 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17248 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000025l.114 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012355 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8651 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9164 |
| Salicaceae | Populus euphratica | 1 | populus_peu00931 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132611459 |
| Tamaricaceae | Tamarix chinensis | 2 | TC06G1107, TC06G1568 |