Basic Information
Locus ID:
gene-BS78_06G229400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 38026657 | 38029298 | + | gene-BS78_06G229400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 62,450.15 Da | 51.29 | 100.20 | -0.11 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50270.2 | - | 0 |
| RefSeq | XP_022683959.1 | uncharacterized protein LOC101769969 [Setaria italica] | 0 |
| Q9FGR8 | Putative FBD-associated F-box protein At5g50270 OS=Arabidopsis thaliana OX=3702 GN=At5g50270 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3L6Q7Q9 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM15G22100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 21 | AH01.379, AH06.351, BH01.347, BH01.349, BH01.350, BH01.351 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_4BG0334820 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006876 |
| Poaceae | Oryza coarctata | 6 | Oco05G027310, Oco09G009330, Oco15G005400, Oco21G001910 ... |
| Poaceae | Oryza sativa | 2 | LOC_Os03g25670.1, LOC_Os08g17110.1 |
| Poaceae | Paspalum vaginatum | 9 | gene-BS78_01G032200, gene-BS78_01G344200, gene-BS78_K091300 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G001580, Chr12G033300, Chr23G004370 |