Basic Information
Locus ID:
gene-BS78_06G228900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37994324 | 38003179 | - | gene-BS78_06G228900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 111,520.90 Da | 31.53 | 90.90 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 708 | 970 | 3.18099E-98 | - |
| Pfam | PF11721 | Malectin domain | 435 | 620 | 5.3E-44 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 704 | 967 | 1.7E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 970 | 4.51E-84 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 82 | 413 | 6.12E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 414 | 3.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 286 | 8.1E-51 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 778 | 981 | 1.4E-60 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 430 | 623 | 2.9E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 777 | 1.3E-37 | - |
| SMART | SM00220 | serkin_6 | 702 | 970 | 5.1E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 702 | 976 | 39.43882 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 708 | 730 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1032 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1026 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_039821920.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Panicum virgatum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0Q4G9 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG400700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology