Basic Information
Locus ID:
gene-BS78_06G228600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37940399 | 37956878 | - | gene-BS78_06G228600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.76 | 111,534.90 Da | 31.26 | 88.98 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 703 | 965 | 2.25257E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 699 | 962 | 2.9E-49 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 430 | 615 | 1.7E-45 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 965 | 1.5E-85 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 91 | 405 | 4.76E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 409 | 2.2E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 772 | 5.1E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 49 | 281 | 1.8E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 981 | 3.1E-61 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 425 | 618 | 4.2E-36 | - |
| SMART | SM00220 | serkin_6 | 697 | 965 | 5.3E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 975 | 39.749767 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 703 | 725 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 817 | 829 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1005 | 1021 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1005 | 1027 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_039821920.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Panicum virgatum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0Q4G9 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG400700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology