Basic Information
Locus ID:
gene-BS78_06G227700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37874424 | 37878044 | + | gene-BS78_06G227700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 58,259.83 Da | 44.76 | 74.91 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03478 | Protein of unknown function (DUF295) | 427 | 478 | 4.1E-9 | IPR005174 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 254 | 481 | 1.88E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 78 | 124 | 7.98E-5 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 38 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025825454.1 | uncharacterized protein LOC112900890 [Panicum hallii] | 0 |
| TrEMBL | A0A2S3IB19 | DUF295 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G318100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 18 | AH02.1462, AH05.3101, AH06.1727, AH09.2454, AH09.2531 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_1AG0014690, gene-QOZ80_1AG0014700 ... |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_049542, gene-QYE76_059872, gene-QYE76_059876 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_06G227700, gene-BS78_06G262500 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr17G013480, Chr23G002270, Chr26G017100 |
| Poaceae | Zea mays | 3 | Zm00001eb068140_P001, Zm00001eb171130_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-12239, nbis-gene-23041, nbis-gene-6051 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g20571, Zma_g22113 |