Basic Information
Locus ID:
gene-BS78_06G226600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37762439 | 37767433 | - | gene-BS78_06G226600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 52,565.76 Da | 40.64 | 83.71 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 21 | 304 | 6.9E-51 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 340 | 439 | 1.8E-13 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 324 | 3.55E-67 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 336 | 460 | 1.52E-17 | IPR008962 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 92 | 1.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 324 | 7.3E-49 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 335 | 463 | 9.6E-24 | IPR013783 |
| SMART | SM00220 | serkin_6 | 21 | 314 | 1.8E-33 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 339 | 461 | 17.335146 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 314 | 35.184486 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 156 | 168 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044447144.1 | putative receptor-like protein kinase At4g00960 [Triticum aestivum] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6THG4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology