Basic Information
Locus ID:
gene-BS78_06G223900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37595954 | 37602069 | + | gene-BS78_06G223900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 83,511.77 Da | 43.63 | 92.78 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 510 | 758 | 5.30943E-128 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 505 | 758 | 1.1E-64 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 156 | 363 | 6.7E-70 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 484 | 758 | 7.42E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 497 | 581 | 6.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 583 | 766 | 2.9E-60 | - |
| SMART | SM00220 | serkin_6 | 504 | 765 | 2.1E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 504 | 762 | 44.852142 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 625 | 637 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 510 | 531 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 729 | 751 | 2.0E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 666 | 676 | 2.0E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 578 | 591 | 2.0E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 619 | 637 | 2.0E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 685 | 707 | 2.0E-11 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_012702727.2 | serine/threonine-protein kinase CTR1, partial [Setaria italica] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6TUP9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G244500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology