Basic Information
Locus ID:
gene-BS78_06G150800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 31769346 | 31775764 | - | gene-BS78_06G150800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 90,944.11 Da | 55.77 | 62.58 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 28 | 247 | 1.51E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 587 | 627 | 1.13E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 584 | 634 | 7.5E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 795 | 817 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 829 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 493 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 683 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 715 | 729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 386 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_034602583.1 | uncharacterized protein LOC117863099 [Setaria viridis] | 0 |
| Q9S9P0 | Sister chromatid cohesion protein PDS5 homolog E OS=Arabidopsis thaliana OX=3702 GN=PDS5E PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6TWQ4 | Tudor domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G165000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology