Basic Information
Locus ID:
gene-BS78_06G139200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 30856562 | 30858914 | - | gene-BS78_06G139200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 51,188.81 Da | 42.06 | 94.35 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 131 | 318 | 9.42E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 86 | 376 | 2.3E-11 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002446938.1 | F-box/FBD/LRR-repeat protein At5g22660 [Sorghum bicolor] | 0 |
| TrEMBL | A0A0A9BXV8 | F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH09.1354 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_01G454500, gene-BS78_06G136700, gene-BS78_K067800 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0307229 |