Basic Information
Locus ID:
gene-BS78_06G105500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28217215 | 28219686 | - | gene-BS78_06G105500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.36 | 22,471.61 Da | 57.95 | 71.22 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 158 | 203 | 3.70472E-18 | - |
| Pfam | PF01849 | NAC domain | 64 | 119 | 1.1E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 164 | 203 | 4.6E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 165 | 202 | 6.4E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 70 | 123 | 1.9E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 64 | 120 | 2.5E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 61 | 126 | 17.895262 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 168 | - | - |
| Coils | Coil | Coil | 3 | 35 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_004984363.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Setaria italica] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | K4AF92 | NAC-A/B domain-containing protein OS=Setaria italica OX=4555 GN=101754195 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology